rs47553247 SNP Detail

Summary

• ID
  rs47553247
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:174887849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAATACAT CAAACAAATG
  ACTCTCCCTC CCCCAAACAT CCCTCTCCTC CCAGCCTCCC CACCCCACTG CAAACAGACT
  GATGGGGTCA CAGCACACAT TAGCAAATCA TAAACATGTC AATAAACGTT CCACGTAGGC
  TGAGCTATGA GCCAACACCC AGGTTCCCAA CTGGAAACAC ACATCCTGAC AGGAGTCTGA
  K
  CTAGGTGCTC TGCGGGGCAA CAATGTGAAT GCATTCTGTT GAGTTGGAGC TACATTTGCA
  AATATCGAGA TGTGTCAGGG TGCAATTGGA CTGTATAACA TGCACTTTTG AGTGTATGGT
  TGGTAGGAAC TCAAACTTGA ATCTATCCCT CCCATGTAGA CTTAATGGAG AAAAAGAAGC
  CAACTGTGAG TCTTGAGATA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss60347203	NES15840949	PERLEGEN	MM_PANEL2	f	SNP	G	T	G	T	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs47553247					SNP	G	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60347203	NES15840949	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174887849 () rs orientation: forward

Symbol	Name	Function Class
6330418B08Rik	RIKEN cDNA 6330418B08 gene	1674 bp downstream
Rgs7	regulator of G protein signaling 7	Intron