rs47566997 SNP Detail

Summary

• ID
  rs47566997
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:91858329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTA GAAGAAGAAT CTGTGCAGTA
  K
  GTAAATATTC TTTGGTTACA TAGTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148559155	ENSMUSSNP2010060	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss325277727	CHEV_16_92061686	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47566997					SNP	G	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:91858329 () rs orientation: forward

Symbol	Name	Function Class
Gm49711	predicted gene, 49711	within coordinates
Mrps6	mitochondrial ribosomal protein S6	within coordinates
Rr519575	regulatory region 519575	1821 bp distal
Rr519576	regulatory region 519576	1574 bp proximal
Slc5a3	solute carrier family 5 (inositol transporters), member 3	within coordinates
Tssr139461	transcription start site region 139461	1287 bp downstream