rs47567187 SNP Detail

Summary

• ID
  rs47567187
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101019212 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATC CTGTTTGTCC GGGTCATCTT
  W
  TTTGTGTGTG TTTTGTTTGC ATGTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145550945	ENSMUSSNP1579495	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47567187					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101019212 () rs orientation: forward

Symbol	Name	Function Class
Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	within coordinates
Rr152366	regulatory region 152366	1412 bp distal
Rr152367	regulatory region 152367	589 bp proximal
Rr159072	regulatory region 159072	1411 bp distal
Rr159073	regulatory region 159073	12 bp distal
Rr162868	regulatory region 162868	1635 bp distal