rs47574151 SNP Detail

Summary

• ID
  rs47574151
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:72907406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTCCTCGGT GTGTCTGGGT ACTGGTGGCA ACCTCTGCTA
  GGGTTGAGGT AATACATGTG AAGTGCCCAA GGCAGTGCCT GATATACATT GTCTCTGGAA
  M
  TCACACACAC ACACACACAC ACACACACAC AGGGTCTTCT TGGTTTCTTG GTGCTATAAT
  CCTTGCTCCT TGGTTGGGCT TTTGGCTGCC TATGATGGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132418963	ENSMUSSNP7158630	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47574151					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:72907406 () rs orientation: forward

Symbol	Name	Function Class
4732414G09Rik	RIKEN cDNA 4732414G09 gene	within coordinates
Cpgi3228	CpG island 3228	1915 bp proximal
P2rx1	purinergic receptor P2X, ligand-gated ion channel, 1	1380 bp downstream
Rr247151	regulatory region 247151	1594 bp proximal
Rr369285	regulatory region 369285	1186 bp downstream