rs47575701 SNP Detail

Summary

• ID
  rs47575701
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:100307923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACCATCTG TACAGCTACA
  GTGTGTGCTC ATATACACTA AATAAATAAA TAAATAAATA AAACAAACCA TGCTCACTAA
  AGCCACTCAG CACCCGTGTC TAAAGCCTTC CCATAATGCA AAAAAATGTA GCTGTCAGAG
  ACTGGCTGCC TAAGTGAGAC CTGCGGCTGA TGAGTGCCGA GAGCGGAACT TGCCCTTGCT
  C
  TCCCCAGGAC ACAGGGTTCC CTGCATGGAC CGCCACTGAC CTCCTCCTCA GGAATGGGGA
  TTTTCTCATC AAAGTAGGTG GTGAAGGGCT CCTCAGAGTC TCCAGTGGAA TGTGGGAGGG
  ATGAGTTGCT GTAGGCAGGG TTGATGGCGC CAAGGCTGGC AGAGTCTCCA TGGTCCCCAG
  AAGCGCCATC TGAGTCAACA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148475135	ENSMUSSNP2784652	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs47575701					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100307923 () rs orientation: forward

Symbol	Name	Function Class
Rr509705	regulatory region 509705	568 bp proximal
Slc11a2	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	Intron
Tssr136419	transcription start site region 136419	117 bp downstream