rs47576273 SNP Detail

Summary

• ID
  rs47576273
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:75828550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCATTTAGT CTTTAGTGGT
  CCTGAGCTAA CCTATCAGTG GTGTGAAGAC ATCTTTACTG CCCAGAGGCA AACTGTGATG
  CCGCCAGAAG GCATTTGCAT CTTAATGTGT ACTGAAAGAC CTAAGGACTG TAAAGGATCA
  AAAGAATCTC TGGGGTCCCC TGATGGGATT TCTTTGTTTG CATGAGAGGA AGGGGGCAGC
  C
  ACCCGGGCGT CCTTTCTTAG TCACTCTACA TTGGTAGCTA CTTCATTTTT TAAAATCAGG
  GCCAGACGCT CCTACTCAGA GGACATGTTG ACCATAATGC ATTGTGAACA GTGTTCCCTC
  TCCTGAGGCC ATTGGCCTAT CCTTTTCAGC ATCACTGTAT TAAGTAAACA GCAAGCACCT
  AGACTAATCC ATTACCAAGG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145965567	ENSMUSSNP5233783	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47576273					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:75828550 () rs orientation: forward

Symbol	Name	Function Class
Rasgrp3	RAS, guanyl releasing protein 3	within coordinates
Rr531054	regulatory region 531054	1134 bp proximal
Tssr145886	transcription start site region 145886	928 bp downstream