CAAAG GTTTGGTTCT TTTATGGCTT R TATACATTTC TATACACTCT CACAT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
MSM/Ms |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss148843712 | ENSMUSSNP4418300 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | A | ||
ss322527934 | CHEV_8_23914198 | CHEVERUD | SCREENING_POP | f | SNP | G | G | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
MSM/Ms |
SM/J |
||||
rs47579036 | SNP | G | G | G | A | G |
Location: Chr8:23293742 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
1700041G16Rik | RIKEN cDNA 1700041G16 gene | 1885 bp upstream | ||||||
Ap3m2 | adaptor-related protein complex 3, mu 2 subunit | within coordinates | ||||||
Cpgi20156 | CpG island 20156 | 1581 bp proximal | ||||||
D8Dcr5 | DNA Segment, Chr 8, Derry C. Roopenian 5 | 1612 bp distal | ||||||
Rr381798 | regulatory region 381798 | within coordinates | ||||||
Rr400791 | regulatory region 400791 | 1840 bp upstream | ||||||
Rr660722 | regulatory region 660722 | 1637 bp distal | ||||||
Rr660723 | regulatory region 660723 | 1807 bp distal | ||||||
Rr660724 | regulatory region 660724 | 1289 bp proximal | ||||||
Rr660725 | regulatory region 660725 | 1868 bp proximal | ||||||
Tssr80611 | transcription start site region 80611 | 157 bp downstream | ||||||
Tssr80612 | transcription start site region 80612 | 1870 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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