rs47585291 SNP Detail

Summary

• ID
  rs47585291
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164477123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAGTAAC AGTATCCTCG
  TTGGCCAAAA AGAATGCTTC CCCCATCCCA TATAAGCAGT TTTCTCCTCA TTATGTCATG
  TCAATAAGCA GAGACAAATA GGTCTAGGAG TCTGGGTGAA AGAGACTAGA CTGCTAAAGG
  GTGGGAAGGT AGGAAAAATC TAAACTAGGA GGTAGGGGTT AGGGGCTGGG GGGGGAGGGG
  T
  GGAGTTAGAG AAAGTACTTG GGGTAGCAAC AGTCCTGTAA CTATAGACAA AAGTGGGGCC
  TCCGTTCCTG GAACAGCTTA TGGGGAAGGA GGTAGGCAGG GAAGACATTG TCTGGGCACC
  CTCACCCCTA CCCACACCTG ATTCAAGAGG ACGGTCCAAC AGGAGGTTGG TCTTCCAACA
  CTTTCCGAGT GGCTTGTAAC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148229656	ENSMUSSNP2021321	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47585291					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164477123 () rs orientation: forward

Symbol	Name	Function Class
Gm74576	predicted gene, 74576	406 bp upstream
Rr40355	regulatory region 40355	78 bp proximal
Rr52775	regulatory region 52775	60 bp proximal
Wfdc16	WAP four-disulfide core domain 16	within coordinates