rs47585381 SNP Detail

Summary

• ID
  rs47585381
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:144177277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGTTTTT GTTTTTCGAG
  ACAGGGTTTC TCTGTGTAGC CCTGGCTGTC CTGGAACTCA CTCTGTAGAC CAGGCTGGCC
  TCGAACTCAG AAATTTGCCT GCCTCTGGCT CCCAAGTGCT GGGATTAAAG GCATGCGCCA
  CCACGCCCGG CATCTTAGCA TCATTTCTAT TGCTGTCATA GACACCATGA TTAAAACCAC
  G
  TGGGGAGAAT GGGGTTTACT TCATCTTAGA GCTCTCAGAT CACAGTCTGT CACTGAGGGA
  AGTCAGGGCA GGAACCTGGA GGCAGGAACT GAGAAGCAGA GGCCAAGGAG GAGGCCTGCT
  GTCTGACTTG CTCCTTTTAG CTTGCTCAGC CTGCTTTCTT TTTGTTTTTG TTTCTTTGTT
  TGTTTGTTTT TTCGAGACAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321709563	CHEV_5_145001336	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47585381					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144177277 () rs orientation: forward

Symbol	Name	Function Class
2900089D17Rik	RIKEN cDNA 2900089D17 gene	1314 bp downstream