rs47586331 SNP Detail

Summary

• ID
  rs47586331
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:136209773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTG GTCATGATAT CTCTTCACAG
  M
  AATGGAAACC CTAACTAAAA CAAGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	MSM/Ms	SM/J
ss133832669	ENSMUSSNP6949230	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		C
ss321994345	CHEV_6_136182793	CHEVERUD	SCREENING_POP	f	SNP			A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	MSM/Ms	SM/J
rs47586331					SNP	A	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:136209773 () rs orientation: forward

Symbol	Name	Function Class
Tssr2040	transcription start site region 2040	1282 bp upstream