rs47592116 SNP Detail

Summary

• ID
  rs47592116
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:37562043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCCAAGTA ACCCGGTTCA TCATGGAGGC AGGCGTCAAG
  CTAGGCATGC AGTCAATCCC CATTGCTACC GCGTGCACCA TTTACTGTAA GTTCTTCTGC
  T
  AGATCAACCT GGATGCATAT GACCTCTACC TGGTCGCCAT GTCTTCCATT TACTTGGCCT
  GCAAAGTAAA GGAGCAACAG TTGCGTCCTC GTGACATCA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss144490056	ENSMUSSNP4380510	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47592116					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:37562043 () rs orientation: forward

Symbol	Name	Function Class
Ccnq-ps4	cyclin Q, pseudogene 4	within coordinates
Gm18267	predicted gene, 18267	421 bp downstream
Gm64931	predicted gene, 64931	79 bp upstream