rs47598772 SNP Detail

Summary

• ID
  rs47598772
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132293687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAAGAGAA ATAGGGATTA TCTCAGAAAA ATTACCTAAA
  TTGTCCTTTA CTATTAATGA TATAAAATTC TTTGGTATTA TCAGGTGGGT GGGTTGTGTT
  T
  TTGTTATTTT TTTGTTGTTG TTGCTTTCCC TGGATGTGAT GATCGATGTA TTTGGAAGGG
  AGAATATCCT AGTATTTGGT AAATTTCTCT CATTCTGTG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss133730249	ENSMUSSNP5196307	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47598772					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132293687 () rs orientation: forward

Symbol	Name	Function Class
Prb1b	proline-rich protein BstNI subfamily 1B	1981 bp upstream
Tssr2031	transcription start site region 2031	1967 bp upstream