rs47600567 SNP Detail

Summary

• ID
  rs47600567
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118688465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCAGCCCA GCCCAGCCCA
  GCCCAACCCA GCCCAGCCCA GCCCCCACCC CGCCCGTGCC ATTTCCTATG GAACCTTTCT
  TAATCGACTG CTCTTTCAGT CTTCTACAGA CAGCCAAGGA GAGCCCATTT CCTTGTGAAA
  CTTTCTTCTC CTGAAGATCC CTCAGTCACA TCCTTGCACC CGAGATAAAG GACATAAAAC
  Y
  TCACATCACC CACAGACGAG GCTTGGCCCG GTTTGGCACG TGAGCATTGC AGCTTAGTCT
  CACACCAAGG TCCTCACTCT CTGGGCTCCA CAAGGGCCAT CCTTCGGCTG CTTGCTCAAC
  GTCATGTCAC CACCCACTCT TCCTCAGAAA AAGCTATTTC CTTGAGAAGC CACCCAGGAC
  CTATACAACA CAGGACGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
ss61322052	NES16929561	PERLEGEN	MM_PANEL2	f	SNP	T	C		T	C
ss323503887	CHEV_10_118289616	CHEVERUD	SCREENING_POP	f	SNP			C			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
rs47600567					SNP	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61322052	NES16929561	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118688465 () rs orientation: forward

Symbol	Name	Function Class
Gm67702	predicted gene, 67702	321 bp downstream
Rr226050	regulatory region 226050	136 bp proximal
Rr226051	regulatory region 226051	1137 bp proximal