rs47601834 SNP Detail

Summary

• ID
  rs47601834
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3904187 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              TTCTGGAAAA AGTATCAAAG
  TGTTGCTCAG CACTATCCGT TCTTACACTA GGATACAGTC AGCACACTGT GCTTAGGAGA
  TGGGATTTGC TACTGAAGCA ACACTCTGGC TGTTTTGAGT TTGCTTGCTT CTGTTGTCTT
  CATATGGCAT TGTAGTTTTG AAGTGGACTT TCCTGGGTGC ACTTTGATTG AACATTGCTG
  S
  AGAGGTTCCT AGCAGGAAAA GCTTTACTTT TCTTGTAGCT TTTACTTAGG GACTGAGAGA
  GGCTTGGCTC CAGGATCACC ACAGCTACAT CAAAGGTCAG GGTTCCGTCT TCAGTGGCCC
  AAGTTATTAA TAGAGATCAG AAAATAGATT TTACAATGGG GAAATTAATC AAGTTACAAA
  GTTCCAAATG AAAACCAACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146746461	ENSMUSSNP3002495	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47601834					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3904187 () rs orientation: reverse

Symbol	Name	Function Class
Plekhg1	pleckstrin homology domain containing, family G (with RhoGef domain) member 1	within coordinates