rs47616754 SNP Detail

Summary

• ID
  rs47616754
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33152331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTGTGAC TCCTCTTCAT
  CTTGTCCTTC TTCAGACAGG TCTTCCCTGA CTTTCCACTC CTGAACACTC TCACCTACAT
  CCTTCTTCCC TCTACTCCTG GTTCTTCCCA CACAGTTTTC TTTGTGGAGC ACTTTTTTTT
  TTTCAGTGCC CCGACTGAAC ACCATGAAGA CTGGGTTCAC GTAGGTCTTG TTTATGTGTG
  C
  AGCCCCGTGT AAATGTCAGC AATGTTAACG TATTAAGTGA ATGAAACCCT CAGTGGAGGG
  ATGCTGGCCA CGAGCTGTGC AGCTACCCAG CTGGGTCCAG ATGGAGCCCC CGGCAGCAAA
  GAAATTAACA AATGAGCCAC CAATCACAAG CCGTGAATCA GCGCAGTATT TACATTCCTT
  TGTCAAACAT CATCGCTTAG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137582106	ENSMUSSNP2532821	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47616754					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33152331 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	381 bp upstream
Rr464869	regulatory region 464869	within coordinates
Rr464870	regulatory region 464870	392 bp proximal