rs47618567 SNP Detail

Summary

• ID
  rs47618567
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37740562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGCTGTTT GAACTCACCA
  AGAAGATGAG CCTGGAGGTG GGGTTGCCAG CCCCATTTCA TACCTAAACA GATTTGTCTC
  AAAGTGCCCA CCCCCAAGGT CTGGAGATTG GCTGCCTTCT GAGTCTGTGA TAGAGAGAAA
  ATCGACAAAC AGCTCAGGAA TGAAAACACT GTCCCTGAGA ACAACTAGAA GAGAGGATGC
  R
  ATTGTTTATC CCCCTAATAT AAAAATGTCT GTAGTGGGGA GGAACAGCCG GAAGTTCAAC
  AGTGCGAGAA AGATCACTGG GAGAAGGAAC GTTAGCGGAC CCCTTGACTT ACCCGGTGTA
  ATTCTGCTGG GTGTTTTGAG CAGTCAATTA GCCAATGTTT GCTCACCCAC TCAATCTCTT
  TCTGATTCTT TCCCTTCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134811077	ENSMUSSNP7197846	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47618567					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37740562 () rs orientation: forward

Symbol	Name	Function Class
Gm65174	predicted gene, 65174	619 bp downstream
Rr575540	regulatory region 575540	366 bp proximal
Rr575541	regulatory region 575541	737 bp proximal
Rr575542	regulatory region 575542	839 bp proximal
Rr575543	regulatory region 575543	1319 bp proximal