rs47624159 SNP Detail

Summary

• ID
  rs47624159
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:33576872 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAA GTCCCTCACC GGTGTGCTCA
  R
  CCATTGTTGG GTTTTAGTTA ATTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146407814	ENSMUSSNP3860396	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss320223153	CHEV_2_33542380	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47624159					SNP	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:33576872 () rs orientation: forward

Symbol	Name	Function Class
Rr367177	regulatory region 367177	1973 bp upstream
Rr555308	regulatory region 555308	755 bp proximal