rs47626692 SNP Detail

Summary

• ID
  rs47626692
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121614773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACCATAGT TTTGCCAATA
  TAACTGCATT TTATAGTGAT ACATTTTGAG ATAAGACATA TAAACTGTCT TATAACGACA
  TGTGCCAATA TGTTAACTCA TACGGAACTA TCCAATTTGT GTAGGTAATA AATTGGTTAA
  AGACTTATTA GTGGTTATTG TTGTTATGGA GAAAAGACAG AACTCAGCAG ATGAAGAGGA
  Y
  ACAGGACATC TGAGGATGAG TGTAGTAGCA GGCACTCTCA GGGGCCTGTT ATATTCTGAT
  TTAGGAAGAA ATCATTTTAT CGCCCAACCA TCTGTCATAG GATCTGATGC CCTCTTTTAG
  GTATATGTGA AGACAGGTCA CTCATATACA TAAAAGAAGA AGGAAAGAGG AGGAGGAAGA
  GGAGGAGGAG TTGATGGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135729777	ENSMUSSNP5949206	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47626692					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121614773 () rs orientation: forward

Symbol	Name	Function Class
D3Mit347	DNA Segment, Chr 3 Massachusetts Institute of Technology 347	1941 bp proximal
Rr584177	regulatory region 584177	307 bp distal
Rr584178	regulatory region 584178	611 bp proximal