rs47629215 SNP Detail

Summary

• ID
  rs47629215
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48032806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCTGTCCTG GAACTCACTT TGTAGACCAG GCTGGCCTCG
  AACTCAGAAA TCCGCCTGCC TCTGCCTCCC GAGTGCTGGG ATTAAAGGCG TGCACCACCA
  Y
  GCCTAGCTCA GAATTCCTAA TTCTTATTTA GAAAATTTAA AAACATTTTT TGTTTACATA
  TTTTGTACAT GTGTACCATA GCACATGCGT AGAGAGCAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145708732	ENSMUSSNP69058	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss325406493	CHEV_17_47858830	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47629215					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48032806 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr12	DNA Segment, Chr 17, Derry C. Roopenian 12	707 bp proximal
D17Mit66	DNA segment, Chr 17, Massachusetts Institute of Technology 66	694 bp proximal