rs47633183 SNP Detail

Summary

• ID
  rs47633183
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:20417767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTTTGTA CATACCACTA
  ATTCCATTCC CAGACTAAAC GTAGCTTAAA AAAAAAAAAG TGATTTTGTC TGTGTGGGAA
  GTACTGGTCC TATGGCACAT ATGTTGAAGT CGGAGGACAA CTAGCAGGAG TTTACTCTTT
  TCACCATGTG TAGAAGTCAG AGGACAACTT TTAGGAGTCT TTCTTCCACT ATGAATTTTG
  R
  GGAAGGAACT CTGGTCATCT GTTTTCTTTA TAAGGCAAGT ACTTGCTATG TAGTTACCAA
  GGTTGATGTA GAACTCACAG ATTCTTGCTT CCACTTCTCA AATGCTACTA GGAGCAGCAT
  CTAATTTACC TATCAATGTG TTTATAGCTC CAAAGAAAAT GTTTAGCCTC TTCCTTCCCT
  GGTCCCTCAT TCCCAGCATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss134095074	ENSMUSSNP1862139	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47633183					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:20417767 () rs orientation: forward

Symbol	Name	Function Class
Rgn	regucalcin	within coordinates
Tssr160646	transcription start site region 160646	1811 bp downstream
Tssr160647	transcription start site region 160647	1732 bp downstream
Tssr160648	transcription start site region 160648	795 bp upstream