rs47634528 SNP Detail

Summary

• ID
  rs47634528
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152627526 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGTAAAAG ACTAAGGACC
  TCATGATTTC CTCATGGCAG TTTCAGGTCA CATATTCTTA GTTCCACACA TCAGCTTAAA
  AAATAATAAC AAAGGCAGAA AAGGCCCTCA GGGTACTTTC CCTATCTTCT GTGGAACAAA
  ACACTGATAC ATAAAGGAGA AAACCTCACC TGTACCAGTT GGTCTTCCGA TTGCTGGGGG
  K
  CATCACTGTT CCTTCTGTCT GTTCCAAGTG CATGTGTCGA GCGTGTGTGC CCTGTTCATA
  CTGTGTGAGC ACGTGGTGGA GTGTGTCTGC ATCTGTGCGT ACAGGAACGT GGAGGCCCGA
  GGCTGACCTC TACTGTCTTT CTCCACTGCT CTCCACCTTT GTTTTCTGAG ACAGGCTCTA
  TCACAGAACC CGGAGCCTGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145734734	ENSMUSSNP5587278	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47634528					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152627526 () rs orientation: forward

Symbol	Name	Function Class
Apobec4	apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 4	within coordinates
Gm28792	predicted gene 28792	within coordinates
Rgl1	ral guanine nucleotide dissociation stimulator,-like 1	within coordinates
Rr31152	regulatory region 31152	within coordinates
Tssr9415	transcription start site region 9415	1249 bp downstream
Tssr9416	transcription start site region 9416	1222 bp downstream
Tssr9417	transcription start site region 9417	1211 bp downstream