rs47634698 SNP Detail

Summary

• ID
  rs47634698
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32573031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAATGTCT CTCATGAAGG
  CATCATTTCT GCCTTATCAT TTTGATCTTG CAAATCCACA TGAAGCTTTG CAGTTATGAA
  CTTGCATTTG TCCCGAATCC CGGTCTTTCT AGCAAATTCT TTTAAAGCAG AAGCTCCGGC
  TGTTGGGTCT CTAAACCTAA CTAGGTGTCC TGTGCAGAAC TGAGTCAAGA CCGGCAGAAT
  K
  GTGTCCCGTT AGCATGCTAA ACGTGACCCC AAAGTGCCTT CAAAGCAGTT CTCAGCTGTT
  TCTGTGGCCC ACAGAGGAAT GCTTCCTCCT CCAGGTCTGA GAAGGACTGG GCATGGTGGC
  CTGCTGTCCC AGCACTCAGG AGGCTGAGAA CAGGCAGGAA AATCTTGGAT TTGAGGACAC
  CCTAGGCAAT ACAGTGAGAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148200800	ENSMUSSNP6641828	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47634698					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32573031 () rs orientation: forward

Symbol	Name	Function Class
D5Mit334	DNA segment, Chr 5, Massachusetts Institute of Technology 334	1991 bp proximal
Rr609356	regulatory region 609356	1765 bp distal
Rr609357	regulatory region 609357	738 bp distal
Rr609358	regulatory region 609358	945 bp proximal