rs47636102 SNP Detail

Summary

• ID
  rs47636102
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:41518509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGTTAGCA TCAGCTTTAA
  TTTTATGAGA CTTCATACAT TCAATGATTC TTTTAAAGAA TTGGAAGAAC CTAATATGTC
  CCAGAACCTC GTAAGTGGTG ATACCAATAT ATTTAACAAT CGAAAACAGC TGAGGAGACT
  TGGCACTGGA GTCAAGAGGG AGTGTGGGGA CCAACTGTAC CTCAGATGAA AATTTGGCTT
  R
  GCCATTTAAG ATGGGCTCCT TGGCGAGAGT TTCTGACTTG GAAGACCATA TTTTACAACT
  TTGGCCCAGA AAGCTCAGTT TCTATAGGGA ACTTATTCTC AGGGTAGTCT GGAGGGGGAT
  ATTTTCAACA ATTGTTTTAA ATTAAAATAG TTTCGTGTAG TGTGGAAGGA ACTAGTGGGC
  AGCTTTGACA GGTCAGCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
ss52248960	NES15256847	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
rs47636102					SNP	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52248960	NES15256847	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:41518509 () rs orientation: forward

Symbol	Name	Function Class
Ccdc162	coiled-coil domain containing 162	within coordinates
Rr222673	regulatory region 222673	1980 bp proximal