rs47638834 SNP Detail

Summary

• ID
  rs47638834
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97445706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTCTATGC CAAAATGATA
  TCATAAATAG CTGAAGAGAG CACAATTCAT AAAGATAACT CATAGTCATT GTGAGTTTTC
  ATAGACATAA CTTTTACTAT AATACTTTAA TAGTAAAGTA ACCAGGCATT GTGATTCTAC
  TTGACTCAAA TTTTACATGG TATATTTTCT CAGAATTTTA CGATTTCACT TAAATTTGCT
  R
  ATGTGCTTGC ATATATATAG ATTTTTAGAT AATAGTAGTA ACTTAAGTAG AAACAGGTAA
  AAAATGTGCC AAATATTCCC ACCATACCTC AGCATGCAAT CTTCCCTGTC CTTTCCAACT
  GTTGTAATTT ATACGTTTTT ATTAACTTGC ACATTCGATA TACAAACACT GTGTGTTGTG
  ACATGATACA ATTATAGACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss61682496	NES17633344	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs47638834					SNP	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61682496	NES17633344	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97445706 () rs orientation: forward

Symbol	Name	Function Class
Rr387670	regulatory region 387670	135 bp upstream