rs47649284 SNP Detail

Summary

• ID
  rs47649284
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:105666647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAGATGAGGA AAAGAATAGA ATTATGAGGA AGAGGGTATG
  CTAACGGACC AATAAAAGGG AAGGAACTGC TTTGGCTTGT GTCTACATTC AAGTTCTCTG
  T
  GAAATGGCTG AGATCTTTTT ATCTGTCATC TGCCTGTGGC CCTGCTTTCC CTTCTCCACA
  GCCACTCTGC ATCTGGGTTA TTTCAGTCCT AGAGGCCGGT C                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146765633	ENSMUSSNP2045075	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47649284					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105666647 () rs orientation: forward

Symbol	Name	Function Class
5430440P10Rik	RIKEN cDNA 5430440P10 gene	within coordinates
Rr497207	regulatory region 497207	1976 bp distal
Rr497208	regulatory region 497208	1646 bp distal
Rr497209	regulatory region 497209	1663 bp distal
Rr497210	regulatory region 497210	1056 bp distal
Rr497211	regulatory region 497211	579 bp proximal