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rs47649284 SNP Detail
Summary
  • ID
    rs47649284
  • Variation Type
    SNP
  • Alleles
    T
Genome Location and Flanking Sequence
  • Location
    Chr14:105666647 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                        A AAGATGAGGA AAAGAATAGA ATTATGAGGA AGAGGGTATG
    CTAACGGACC AATAAAAGGG AAGGAACTGC TTTGGCTTGT GTCTACATTC AAGTTCTCTG
    T
    GAAATGGCTG AGATCTTTTT ATCTGTCATC TGCCTGTGGC CCTGCTTTCC CTTCTCCACA
    GCCACTCTGC ATCTGGGTTA TTTCAGTCCT AGAGGCCGGT C                    
    
    T = T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
ss146765633 ENSMUSSNP2045075 ENSEMBL ENSEMBL_Sanger f SNP T T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
rs47649284 SNP T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr14:105666647 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
5430440P10Rik RIKEN cDNA 5430440P10 gene within coordinates
Rr497207 regulatory region 497207 1976 bp distal
Rr497208 regulatory region 497208 1646 bp distal
Rr497209 regulatory region 497209 1663 bp distal
Rr497210 regulatory region 497210 1056 bp distal
Rr497211 regulatory region 497211 579 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory