rs47652285 SNP Detail

Summary

• ID
  rs47652285
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:93065808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CTCACCCTGA TTAACCAGTA GGAGTGTGTG GGAGAGAGTG
  TGCTGGATCA GAAAAGGGCA ACTCTAAAAG CAAATGCCTG GCCAAGGTGA CGCCTGTCCC
  C
  TTCACATGGG GAAAACCATT TCTGTGTAAT GCCTGCCTCA GGTACCCATA GGTACGTCAG
  GACTTTGACT GGGACATGAT GCCAATTCAA AGTGTCACAT A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss134247149	ENSMUSSNP4688883	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs47652285					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:93065808 () rs orientation: forward

Symbol	Name	Function Class
Gm6987	predicted pseudogene 6987	1658 bp upstream
Rr692410	regulatory region 692410	224 bp proximal
Tssr161483	transcription start site region 161483	1610 bp upstream