rs47655236 SNP Detail

Summary

• ID
  rs47655236
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104895805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCAGGATAC CCCCGGAATA CACGGTGAGT GAGTGGACCT
  AGGATCTTGT AACTGCACAC ATCCTTGCTC TCTGTGTAAC TGTGGATGTC TAGCCCAGAG
  A
  GCAGAGTGTT CTGGGTATGT TGTTCAAAGG CCCAGTTACA GGGTCTCTTG GTTTAAACTC
  ACTATTAATA TGATACGAGA TGGAGAAAAC ACCCCCAAA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss136905109	ENSMUSSNP201795	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss323172161	CHEV_9_104920936	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47655236					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104895805 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Tssr86830	transcription start site region 86830	228 bp downstream
Tssr86831	transcription start site region 86831	198 bp downstream