rs47659114 SNP Detail

Summary

• ID
  rs47659114
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55204745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAG ACCTTGCTAC CTTGGCTTAG
  A
  GACACATATA GAGTGTCCAT TCTAT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss139574328	ENSMUSSNP2286279	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss324641223	CHEV_14_55586125	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47659114					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55204745 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	1470 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	361 bp upstream
Rr407057	regulatory region 407057	within coordinates
Rr492378	regulatory region 492378	694 bp distal
Rr492379	regulatory region 492379	157 bp distal
Rr492380	regulatory region 492380	947 bp proximal
Tssr4419	transcription start site region 4419	986 bp upstream
Tssr4420	transcription start site region 4420	873 bp upstream
Tssr4421	transcription start site region 4421	867 bp upstream
Tssr4422	transcription start site region 4422	815 bp upstream
Tssr4423	transcription start site region 4423	789 bp upstream
Tssr4424	transcription start site region 4424	751 bp upstream
Tssr4425	transcription start site region 4425	638 bp upstream
Tssr125718	transcription start site region 125718	1384 bp upstream
Tssr125719	transcription start site region 125719	1463 bp upstream
Tssr125720	transcription start site region 125720	1493 bp upstream
Tssr125721	transcription start site region 125721	1513 bp upstream
Tssr125722	transcription start site region 125722	1938 bp upstream
Tssr128732	transcription start site region 128732	1992 bp upstream
Tssr128733	transcription start site region 128733	1957 bp upstream
Tssr128734	transcription start site region 128734	1929 bp upstream
Tssr128735	transcription start site region 128735	1886 bp upstream
Tssr128736	transcription start site region 128736	1854 bp upstream
Tssr128737	transcription start site region 128737	1827 bp upstream
Tssr128738	transcription start site region 128738	1815 bp upstream
Tssr128739	transcription start site region 128739	1464 bp upstream
Tssr128740	transcription start site region 128740	1394 bp upstream
Tssr128741	transcription start site region 128741	1321 bp upstream
Tssr128742	transcription start site region 128742	703 bp upstream
Tssr128743	transcription start site region 128743	680 bp upstream
Tssr128744	transcription start site region 128744	351 bp upstream
Tssr128745	transcription start site region 128745	66 bp upstream
Tssr128746	transcription start site region 128746	664 bp downstream
Tssr128747	transcription start site region 128747	693 bp downstream
Tssr128748	transcription start site region 128748	712 bp downstream
Tssr128749	transcription start site region 128749	775 bp downstream
Tssr128750	transcription start site region 128750	794 bp downstream
Tssr128751	transcription start site region 128751	811 bp downstream
Tssr128752	transcription start site region 128752	864 bp downstream
Tssr128753	transcription start site region 128753	1053 bp downstream
Tssr128754	transcription start site region 128754	1132 bp downstream