rs47662312 SNP Detail

Summary

• ID
  rs47662312
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:58884226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CTCCAATTTT AGTCTTGTTA CAATTTATTA AAGACTACCC
  TCTTCGTTAT TATTGGCAAT CAGAAAAGGC AATATACATG GCTTTAAAAT ATAAACCTTA
  G
  AAGTCACGCA TCATTTGTAT TATACTCTCA TTAATTCAAA TAACTCAAAA CCTACCTGAA
  TTAAAGAACA AGAGACATAA ACCCTAGCCC CCAAATAAGA G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss136525641	ENSMUSSNP286794	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs47662312					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:58884226 () rs orientation: forward

Symbol	Name	Function Class
Gm47271	predicted gene, 47271	within coordinates
Neo1	neogenin	within coordinates
Rr383441	regulatory region 383441	1184 bp upstream