rs47664097 SNP Detail

Summary

• ID
  rs47664097
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153630122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCCC TGATCCGTAC TCTGCTGAAC
  W
  GGGATTGTGA AAATGTGGAG GAGAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145749453	ENSMUSSNP2713536	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47664097					SNP	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153630122 () rs orientation: forward

Symbol	Name	Function Class
Rnasel	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	within coordinates
Rr420751	regulatory region 420751	1514 bp distal
Tssr9487	transcription start site region 9487	1574 bp downstream
Tssr9488	transcription start site region 9488	1545 bp downstream
Tssr9489	transcription start site region 9489	1508 bp downstream
Tssr9490	transcription start site region 9490	1385 bp downstream