rs47664187 SNP Detail

Summary

• ID
  rs47664187
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48409281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGA TTGAGGAAAG AAGTCCACAT
  A
  TACACTATGG GTAGGGATAG TGAGG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss136455017	ENSMUSSNP1504713	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322954402	CHEV_9_48306086	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs47664187					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48409281 () rs orientation: forward

Symbol	Name	Function Class
1700121I08Rik	RIKEN cDNA 1700121I08 gene	1624 bp upstream
Cpgi21716	CpG island 21716	1961 bp distal
Gm70225	predicted gene, 70225	within coordinates
Rr195326	regulatory region 195326	1081 bp distal
Rr206379	regulatory region 206379	1480 bp distal