rs47665748 SNP Detail

Summary

• ID
  rs47665748
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92244530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATGGATC TATTTTCATT
  TTTCTACATA CCAACTGCCA GTTAGACCAG CACCATTTAT TGAAGATGCT TTATTTTGTT
  CATTGTACAT TCTTGGCTTC TTTGTCAAAG ATTATGTATC TACAGGTGTG CAATGTTATT
  TCCAGATCTT CCATTCTACT CAATTGATCA ACCTGTCTGT CTCTGTACCA ATACCAGACT
  G
  TTTTTATCAC TATTGCTTTG CAGTATTGTT TGAGGTCAGG AATTGTGATT TTTCTCCAGA
  AGTTCTTTTA TTTTTAAGAA TTGTTTTCAC TATCCTGGGT TTTTTGTTTT TCTACATGAA
  ATTGAGAATT GCCCTTTCCA TGCCTGTGAA TAATTGTGCT GAAATTTTTG ATGGGGATAG
  CATTGAATCT GTAGATTGTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135480996	ENSMUSSNP4765190	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs47665748					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92244530 () rs orientation: forward

Symbol	Name	Function Class
Sprr2d	small proline-rich protein 2D	1917 bp upstream
Tssr30282	transcription start site region 30282	1851 bp upstream
Tssr30283	transcription start site region 30283	1909 bp upstream