rs47669465 SNP Detail

Summary

• ID
  rs47669465
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42752371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATTCTGCT CTACCGAAGG
  GGAAATGGGC TCTCTGCAAA TCTACAATAC AGAGCTAGGT CAGGGAGAGG AGTGGGAAGC
  GAGGCTCAGC AGAGGATTGG GAAGAATTCA GTCACTTGTG CCCAGCAATG GAGAAGGTCC
  TGCCTTCTAA GAGGAACCCT TGAGGGTGTG GGTCTTGAAC AAAAGGAAAC CAGAAAGGAG
  K
  AACTTAACTC CCGAGTCTCC TGCCACCCCC AACTCCCACA CTCAGATGGC TCCGCTTGGC
  TGTGTTGTCC AGCTCCATGG TCAGCTTTTA CTCTAAGCTA GTGTGAACCA GAGAGGTGCA
  TGCAGGCCTT CAACGCAGAT AGGGATCATA TTCTGTTGGC TCTAATCTGT CTTGGGGGCC
  CTAGTTTTAA AATGCTTTTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147084093	ENSMUSSNP4627739	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47669465					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42752371 () rs orientation: forward

Symbol	Name	Function Class
Gm66346	predicted gene, 66346	within coordinates
Rr219455	regulatory region 219455	571 bp distal
Rr222710	regulatory region 222710	697 bp proximal
Scml4	Scm polycomb group protein like 4	within coordinates