rs47671125 SNP Detail

Summary

• ID
  rs47671125
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:93731817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAA TACGTGTGTG CCATTAGCAA
  G
  TAATCCTTTA TCACACGTCC TTTCA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147372009	ENSMUSSNP1773146	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss323405828	CHEV_10_93358700	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47671125					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:93731817 () rs orientation: forward

Symbol	Name	Function Class
4930471D02Rik	RIKEN cDNA 4930471D02 gene	1194 bp upstream
Metap2	methionine aminopeptidase 2	within coordinates
Rr437346	regulatory region 437346	935 bp proximal
Rr437347	regulatory region 437347	1469 bp proximal
Tssr95291	transcription start site region 95291	1201 bp upstream
Tssr95292	transcription start site region 95292	1209 bp upstream