rs47674517 SNP Detail

Summary

• ID
  rs47674517
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:44340691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGCTTGTG CAGTGACAAT ATAAGTAGAA ACTGTCATAA
  TAGTTCATCT CGGGTACGTA TAACTGTCTG TAACATCACC AGTCGGAGGA GAACACCTTA
  W
  ACCCAATGCA GATACCAACC AAGAAGATCA TTGGAGTACT ACACAGTTGC CTGTAACCCC
  AGAACTCCAC AGGACAGTCC CATGTATCCA GTGGTTCCAG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62288826	NES17220225	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	T	A	T	A	T	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47674517					SNP	A	A	A	A	T	A	T	A	T	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62288826	NES17220225	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:44340691 () rs orientation: forward

Symbol	Name	Function Class
BC151093	cDNA sequence BC151093	within coordinates
Ear2	eosinophil-associated, ribonuclease A family, member 2	within coordinates
Gm49099	predicted gene, 49099	within coordinates
Rr299065	regulatory region 299065	within coordinates
Tssr125197	transcription start site region 125197	569 bp downstream