rs47683682 SNP Detail

Summary

• ID
  rs47683682
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:76021912 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T AGCTAAATTA AACCAACTGT GAGCAAAAGA AATCCACCAA
  CAGCAAGAAT CAGCTTTTCC TGTGTGTTGC TGTATGTCTT CTTAAAACTC TAGTGTATGC
  G
  AATCAAAGTG GGGGATGAGC TACTTAGCCG GGTTGGAAGG CTTGCCATGG CAGGAGATCC
  TTTTCCATCC TAGCTTCCTG ATTTCTTAAC AACTTTACAC A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144640667	ENSMUSSNP4978138	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47683682					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:76021912 () rs orientation: forward

Symbol	Name	Function Class
Rhobtb3	Rho-related BTB domain containing 3	within coordinates
Rr273737	regulatory region 273737	1689 bp proximal
Rr277199	regulatory region 277199	1288 bp proximal
Rr277200	regulatory region 277200	1689 bp proximal