rs47688516 SNP Detail

Summary

• ID
  rs47688516
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112295523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTA GAGCTAGGCA CCTAGTCAGT
  R
  CCCCAGCACT TGTGATGGTG TGTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss138716797	ENSMUSSNP6383772	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss324166898	CHEV_12_113567300	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs47688516					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112295523 () rs orientation: forward

Symbol	Name	Function Class
Gm60261	predicted gene, 60261	95 bp upstream
Rr473423	regulatory region 473423	within coordinates
Rr473424	regulatory region 473424	106 bp proximal