rs47694919 SNP Detail

Summary

• ID
  rs47694919
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151997095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGGTCTC CGGGGCATTC
  ACACTCATAT GTGCATTCCC ACACTTCATT AAAAATAACA TCTTTGGCCA GGCGGTGGTG
  GCGCACGCCT TTAATCCCAG CACTTGGGAG GCAGAGACAG GCGGATTTCT GAGTTCGAGG
  CCAGCCTGGT CTACAGAGTA AGTTCCAGGA CAGTCAGGGC TACACAGAGA AACCCTGTCT
  S
  GAAAAACCAA AACCAACCAA ACAAAAAAAC ATCTTTTGCA AATAATTCAG TTGTTAAATC
  CAACTACTTA ATCTACCAGG TGTGCAAAAA TGTAGAGTAA CCGAGGAGGG TTTTACTATC
  CAAAGGACAC TTCAAACTCA TGAGGCAAAC TGTAAAAATG TGCAAACACA TACTACGTGC
  TGTCCTAAGA ACCTGTCTTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136101828	ENSMUSSNP6411286	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47694919					SNP	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151997095 () rs orientation: forward

Symbol	Name	Function Class
Miga1	mitoguardin 1	within coordinates
Tssr32405	transcription start site region 32405	1127 bp downstream