rs47697557 SNP Detail

Summary

• ID
  rs47697557
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66813963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAATGGCAC CATGTGGAGA
  GACAATTCAG AGATTTCTGA TATAATTAGT TCCCTTTGCA CCAGGGTTCA GAACTAAGTG
  CTGCCCCTCA GGCCCCCGCT CTACCATGCA CATATTTGGT TGCTTCCTAA GGCACTAGGT
  TGGTGGCCAA GAAACAATTC AAAATCCCAA GTTCTCTGAC CTCCCAAGCC AACAGGCAAC
  R
  TGCACATCCA CATTAGCTGC CACCAGGGCC TGTTAAAGGG GGCTTGCTCA TGTTCCCAGT
  CAGCACTCTT CTTAAGGGCT TGTGGATTCA TTTACACATT TATTCCAGAC CACTGAAAAG
  GACTGTTTCT AGGCCTAAAT GCTCAATACA CTGAAATTCA TAGAGAATTC CAGCAGTCAC
  TCTGAAAGAT TCAAGTCGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss61411541	NES16801146	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs47697557					SNP	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61411541	NES16801146	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66813963 () rs orientation: forward

Symbol	Name	Function Class
Rab8b	RAB8B, member RAS oncogene family	within coordinates
Rr196777	regulatory region 196777	563 bp distal