rs47705164 SNP Detail

Summary

• ID
  rs47705164
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:29965184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GAGGGTTTTT TTGTGAGGTG GGGGTGGGAG ACAGGCTCAC
  TCAAGAGGTC CATCTGGCCG GGCATGGTGG TGCACACCTT TAATCCCAGC AGAGGCAGGC
  R
  GATTTCTGAG TTCAAGGCCA GCCTGGTCTA CAAAGTGAGT TCCAGGACAG CCAGGGCTAC
  ACAGAGAAAC CCTGTCTTGG AAAAAAAAAA AAAAAAAGAG G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146398036	ENSMUSSNP3622816	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47705164					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:29965184 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11424	CpG island 11424	1957 bp proximal
Rr554206	regulatory region 554206	146 bp distal
Rr554207	regulatory region 554207	1146 bp proximal