rs47719375 SNP Detail

Summary

• ID
  rs47719375
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76376375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAGTCACAGT GGATCATGCA GAGGAAGCCA CAGTGGGTCA
  GGCAGAGGAA GCTACAGTTG GACAGGCAGA GAAAGTCACA GTGGATCATG CAGAGGAAGC
  M
  ACAGTGGGTC AGGCAGAGGA AGCTACAGTT GGACAGGCAG AGAAAGTCAC AGTGGATCAG
  GCAGAGGAAC CCACAGTGGA TCAGGCTGAG GAAGCTATAT C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137906165	ENSMUSSNP6249720	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47719375					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76376375 () rs orientation: forward

Symbol	Name	Function Class
Akap5	A kinase anchor protein 5	Coding-Synonymous
Tssr113950	transcription start site region 113950	656 bp downstream
Tssr113951	transcription start site region 113951	531 bp downstream
Tssr113952	transcription start site region 113952	318 bp downstream