rs47723823 SNP Detail

Summary

• ID
  rs47723823
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73359619 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGCAGGCTGC CTGAGGCCAA AAGCCCCTTC AAGGCCTAGT
  GGCCACACCA GTTCTTCAGT GATGAGGTTT TGAAATCACT TGTTTCTTCA TGTAGGAAGT
  R
  ACCATAAGCA TTGCAAAAGG GTTTTTTTTT TTTTGAAAGA AAAATAAGTC ATGTGTGCTT
  TTGCCGTGGG AGTGTGCCCA GGAGAGTCTC CTCTGTGTCT G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148110683	ENSMUSSNP143065	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47723823					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73359619 () rs orientation: forward

Symbol	Name	Function Class
Gm63120	predicted gene, 63120	within coordinates
Rr504083	regulatory region 504083	1272 bp distal
Tssr4621	transcription start site region 4621	52 bp upstream
Tssr4622	transcription start site region 4622	114 bp upstream
Tssr131529	transcription start site region 131529	64 bp upstream
Tssr134702	transcription start site region 134702	492 bp upstream
Tssr134703	transcription start site region 134703	452 bp upstream
Tssr134704	transcription start site region 134704	437 bp upstream
Tssr134705	transcription start site region 134705	428 bp upstream