rs47728811 SNP Detail

Summary

• ID
  rs47728811
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61564029 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTCAAAAG AATAAGCCAA GGTGGATTTA CGATCAAGTA
  CACGGAAGTC AACACTAGAG AAGCCAATGC ATCTCCAGAA CACTCCTACT TGGAGCCCCG
  R
  AGTACAGTGT GGATGCAAAC AGGAGGACTA ATGTCTCCTC AAAGGCTTCT AGCCTATCAA
  ACACCGACTT ACTTACTTAT ACCTGTAAAA TTTTCAGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139613003	ENSMUSSNP2981139	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47728811					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61564029 () rs orientation: forward

Symbol	Name	Function Class
Gm5461	predicted gene 5461	770 bp upstream
Gm62465	predicted gene, 62465	650 bp upstream
Rr289706	regulatory region 289706	372 bp proximal
Rr297339	regulatory region 297339	971 bp proximal
Tssr129059	transcription start site region 129059	686 bp upstream