rs47730067 SNP Detail

Summary

• ID
  rs47730067
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:94372485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAAGGCA GGCAGATCTG
  GGTTTAATCA GTATCTTAAA GGCCCCTGAT AGGAGAAGGC CCACACAGCT TGGAAATCCA
  CACTGGTGGC AATGCTGCTC TCAGGGCTCC AGATGACCCT GCAAAACAGA AGTGGTTTCA
  CTAGATTAGG AGTGGGGCCT TAGGTGGATT TCTGAGTTCG AGGCCAGCCT GGTCTACAGA
  R
  TGAGTTCCAG GACAGCCAGG GCTACACAGA GAAACCCTGT CTCAGAAAAA AAAAAAAAAA
  AAAGAGTGAG GCCTTTCCCA CCTCACATTA AGAAAAAACA AAGAAATAAA AAACAAACAA
  ACAAACAAAC AACAAAACAA AAAAAAAACA ACAAAAAAAA CCTCTTCAGC CTTCAGAATG
  GCTTTAGGAA CTATTCTGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135505415	ENSMUSSNP2500281	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47730067					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94372485 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Riiad1	regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1			Intron
				Noncoding-Transcript-Variant
Rr580632	regulatory region 580632			4 bp distal
Rr580633	regulatory region 580633			183 bp proximal
Rr580634	regulatory region 580634			1042 bp proximal