rs47733669 SNP Detail

Summary

• ID
  rs47733669
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:103833438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAC CCCTACCAAT GACCATCAAA
  W
  GCTACTGCTT CTTTTCCATC ATTCT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138011980	ENSMUSSNP5848433	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47733669					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:103833438 () rs orientation: forward

Symbol	Name	Function Class
Tssr117531	transcription start site region 117531	1494 bp upstream
Tssr117532	transcription start site region 117532	1439 bp upstream
Tssr117533	transcription start site region 117533	1407 bp upstream
Tssr117534	transcription start site region 117534	1396 bp upstream