rs47733923 SNP Detail

Summary

• ID
  rs47733923
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156056828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCCT GTAGTTTCAA TGCTTGGGAG
  R
  CTGAGGCAAG AGAATCTCCA AGACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145791097	ENSMUSSNP2540867	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47733923					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156056828 () rs orientation: forward

Symbol	Name	Function Class
Gm38113	predicted gene, 38113	1965 bp upstream
Rr421146	regulatory region 421146	75 bp proximal
Rr421147	regulatory region 421147	213 bp proximal
Rr421148	regulatory region 421148	361 bp proximal
Rr421149	regulatory region 421149	481 bp proximal
Rr421150	regulatory region 421150	1379 bp proximal