rs47735977 SNP Detail

Summary

• ID
  rs47735977
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67574851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGG GGTGGAGTTT CTTCCCAACC
  T
  AAATCTGGAG AGGTCAGAAT GGAAC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132331014	ENSMUSSNP6938802	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323721082	CHEV_11_67497527	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47735977					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67574851 () rs orientation: forward

Symbol	Name	Function Class
Gas7	growth arrest specific 7	within coordinates
Glp2r	glucagon-like peptide 2 receptor	within coordinates
Tssr102272	transcription start site region 102272	1860 bp downstream
Tssr102273	transcription start site region 102273	1490 bp downstream
Tssr102274	transcription start site region 102274	494 bp downstream
Tssr102275	transcription start site region 102275	116 bp downstream
Tssr102276	transcription start site region 102276	173 bp upstream
Tssr102277	transcription start site region 102277	587 bp upstream
Tssr102278	transcription start site region 102278	650 bp upstream
Tssr102279	transcription start site region 102279	1024 bp upstream