rs47737523 SNP Detail

Summary

• ID
  rs47737523
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:4821579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTATCCA GGCAGGCATG
  GTACAGGAGG AGCTGAGAGT TCTATGTCTT CATCCAAAGG CTGCTAGTGG AAGACTGACT
  TCCAGGTAGC TAGGGTGAGG ATCTTATACC CACACCCACA GTGACACACC CTTTCCACCA
  GGTTACATCT ATTCCAACAA GGCCACATCT TCAGATGGTG CCACTCCCTG GTCCAAGGAT
  W
  TATAAACCAT CACAGGTATC ATCTATTGCA AGCTTCTGAT CTGTAACAAT TCACAATGTC
  TGGCTTGATT AAGAGATAAG GAATCTCTAA GAAGAGACCT TTCCACAGAA ACAGAGTGTC
  CTCAACTGGG AGACTTTCTC TTTGTCATCT CTGTGAACAG TAGCTTAAAT ATAACCTAAC
  TTCCCTTTCT GACTTAAGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss139164481	ENSMUSSNP6504530	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
ss324563585	CHEV_14_18480631	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47737523					SNP	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:4821579 () rs orientation: forward

Symbol	Name	Function Class
Rr288845	regulatory region 288845	1622 bp proximal
Rr389176	regulatory region 389176	1978 bp upstream