rs47739103 SNP Detail

Summary

• ID
  rs47739103
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:98068534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGGCCTTT CGTATCTAAG
  AGTGTTTGGT CCCATGACTC CAGTGGATAG TCAAAACTGT TGATGTTCAA GTCCTTAACT
  GAAATGGCTT AGTAGTAAGA CATAACCTAC CCATAACCCC ACCCCGCTCC CAACTCTTGG
  AGTTGCCTCT AGATGGTTTG CGACACCTCA TGTGCCGTCT TTACATTCCC ATGGGGAGGA
  S
  TGAAAGCCAA CTGCTTTCCT GAGCCTTCTG GAACTGATTT TTCCACCTTT TCGATCCAAG
  GTTGGTTAGA TTTCAACCTA GCATAAAAAA CTCACAGCTA CAGAGGGTTG ATTGTTCCCA
  TTCTTGCTTT TGGAGAAGCG ACTGACTGCT GGTTGTTGGG TTGTGTTTAA GTCACTCCTT
  TGGAATAAAA ACTTAGTGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145042266	ENSMUSSNP5109962	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47739103					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:98068534 () rs orientation: forward

Symbol	Name	Function Class
Arhgef28	Rho guanine nucleotide exchange factor 28	within coordinates
Cpgi5995	CpG island 5995	869 bp distal
Rr277834	regulatory region 277834	534 bp distal