rs47739160 SNP Detail

Summary

• ID
  rs47739160
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:146669055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC CTCGAAATGA TAAAAGGCCA
  C
  GTGGGAAAAA CTATAGATGA CATCA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss144657754	ENSMUSSNP7055941	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47739160					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:146669055 () rs orientation: forward

Symbol	Name	Function Class
Gm73162	predicted gene, 73162	1284 bp upstream
Rr624745	regulatory region 624745	1944 bp proximal
Rr624746	regulatory region 624746	1953 bp proximal
Tssr54480	transcription start site region 54480	680 bp downstream